PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32669-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 87aa    MW: 9675.77 Da    PI: 8.5596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32669-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.4e-074470530
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C CS
              HLH  5 hnerErrRRdriNsafeeLrellPk.a 30
                      +e+Er RR++++   ++L +l+Pk  
  TRIUR3_32669-P1 44 RKEAERERRQHMKALCAKLASLIPKeH 70
                     589*********************955 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.29E-53370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-64470IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MAGLGSVAQQ DLSDFEMEVR AHEATGRNRG RTSGGTTAAR VVERKEAERE RRQHMKALCA  60
KLASLIPKEH FANPGHNWNS EMRGETD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-48HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM7YKD75e-59M7YKD7_TRIUA; Uncharacterized protein
STRINGMLOC_5684.32e-19(Hordeum vulgare)